biochem - SSP International https://summerscience.org "The educational experience of a lifetime"...since 1959 Wed, 31 Jul 2024 12:57:52 +0000 en-US hourly 1 https://wordpress.org/?v=6.4.5 Day 34- The Final Days (Biochemistry Purdue II) https://summerscience.org/day-34-the-final-days-biochemistry-purdue-ii/ Wed, 31 Jul 2024 12:57:51 +0000 https://summerscience.org/?p=23308 Wow, just like that, SSP has gone by like a leaf in the wind. As I look back on the […]

The post Day 34- The Final Days (Biochemistry Purdue II) first appeared on SSP International.

]]>
Wow, just like that, SSP has gone by like a leaf in the wind. As I look back on the memories I have made and the talented people I have met, I sense that I really changed over the course of these five and a half weeks. However, these days have been stressful as I have been finalizing my final research paper and poster for my team’s presentation tomorrow morning. Usually, I wake up around 7:30ish, but today was different as I woke up at 5 am to work and complete my deliverables. I also skipped breakfast, but I had some Korean snacks given to me by my friend and roommate, Ryan.

After working for about three hours on my research paper, I pivoted to working on MOE, Molecular Modeling Environment, with the rest of my team to compete and submit our modified inhibitor for the inhibitor challenge, which is due at 11 a.m. today. I eventually finished my inhibitor, which has a binding affinity of 11.54, that is surprisingly exemplary compared to the rest of Purdue I and my cohort. Once finished with all the work that needed to be done at the moment, I went to my favorite restaurant at Purdue, Grilled Chicken and Rice (please visit it if you are ever on Purdue’s campus), with all of my friends for the final time. I joked with all of my friends and ate delicious food, which is one of my favorite lunches as I look back on it now.

However, I want to talk about yesterday’s fantastic talent show! I made so many memories, from watching others play musical instruments to a brain-rot circus with all of my goofy friends! The talent show topped off my time at SSP, as all of the participants showed their unique sides of themselves and had fun!

Moving on to the rest of my today, after lunch, I went back to my dorm to finish working on some of the work that needs to be done by tomorrow with the assistance of my teammates, Riya and Elbert. After around two hours, we finished the final report with the collective desire to recuperate after relaxing and heading to dinner. After relaxing by hanging out with some friends and discussing our plans after SSP, we all went down to the main restaurant area in West Layfette to eat ramen. I sadly do not have any pictures of us eating because of how much I enjoyed the food I was eating and the fun time I had with my friends.

After dinner, I went back to the dorms to work with my team on the final paper before going to the fields for an annual field day with the entire cohort and facility. We played all kinds of games, from tug-a-rope to various relay races with randomly selected groups. I had a blast spending my time with the cohort and facility as we spent our final days of SSP together.

After the field day, I went back to the dorms to once again work on my paper. I also spent some time with my friends before going to sleep around 11:30, as usual. I was hyped for the upcoming day!

-Cyrus

The post Day 34- The Final Days (Biochemistry Purdue II) first appeared on SSP International.

]]>
Charlie Birthday Prep Vlog https://summerscience.org/charlie-birthday-prep-vlog/ Wed, 24 Jul 2024 22:45:12 +0000 https://summerscience.org/?p=23071

The post Charlie Birthday Prep Vlog first appeared on SSP International.

]]>
Day in the Life of SSPer https://summerscience.org/day-in-the-life-of-ssper/ Wed, 24 Jul 2024 22:43:17 +0000 https://summerscience.org/?p=22960

The post Day in the Life of SSPer first appeared on SSP International.

]]>
Day 29- Frogs Make The Best Hats (Biochemistry Purdue II) https://summerscience.org/day-29-frogs-make-the-best-hats-biochemistry-purdue-ii/ Tue, 23 Jul 2024 13:55:44 +0000 https://summerscience.org/?p=22976 Happy Tuesday! Aimee here. We’ve been locked in writing our research papers recently, so I thought it would be fun […]

The post Day 29- Frogs Make The Best Hats (Biochemistry Purdue II) first appeared on SSP International.

]]>
Happy Tuesday! Aimee here. We’ve been locked in writing our research papers recently, so I thought it would be fun to include aspects of writing them in this blog. I’m not going to write formally, but I included my photos as ‘formal figures’ with captions for yall to view. (Thank you Jimmy for carrying Group 7’s formal figures!!) *Notice: the figures are a bit out of order; I am not the most organized!

This morning started off like usual; my alarm woke me up at 6:30, I snoozed it, it woke me up again, I snoozed it again… Until I opened my eyes and I was running late! I quickly got ready, then headed off to breakfast at Ford Dining Hall with Hana and Jimmy, who are also some of the few people who go to breakfast in the morning (Figure 1).

Figure 1: SSP participants going to breakfast before 8:30 lecture. Depicts Hana (left) headed to the dining hall from Honors South Dorms and Jimmy (right) halfway through his meal at Ford Dining Hall.

After breakfast, we headed off to the pharmacy building for the first lecture of the day (Figure 2). We also walked with Leyu and Andrew (from Biochem I) this morning; it’s so sad that today is their last full day here (Figure 10)! We will miss you!

Figure 2: SSPers walking to lecture. Depicts Anna O (left) walking to 8:30 lecture from Ford Dining Hall, Aimee (right) walking from lecture to lunch at Purdue Memorial Union (PMU), and Stanley (center) walking from PMU to 1:15 lecture.
Figure 10: Purdue Biochem I students Leyu (left) and Andrew (center and right) on their last full day at SSP.

We had an amazing lecture by our AD, Dr. Keithly, who discussed her research in regards to antibiotic resistance in gram positive bacteria (Figure 4). After the lecture, we headed over to Chas, our lab building, to get some work done (Figure 3). Each group is busy developing their Cdc14 inhibitors on MOE (Molecular Operating Environment) and writing their research papers. At 11:45-ish, we took a quick break to build critters with hot glue guns and pipette tips courtesy of the academic staff (Figure 8,  Figure 9).

Figure 4: SSP participants Kevin (left) and Hana (right) before 8:30 lecture.
Figure 3: Participants entering Chaney-Hale Hall of Science (Chas) building for lab. Depicts Jimmy (left) and Elaab (right).
Figure 8: SSP academic faculty: Lab assistant Meghan (left), Assistant academic director Dr. Avard (center), and Academic director Dr. Keithly (right).
Figure 9: SSPers at Chas during lab time. Depicts teacher’s assistant (TA) Ritvik (left) holding lab groups’ freezer boxes and Mingjia (right) holding a humming bird made of pipette tips she made during her break.

At around 12, we were dismissed from Chas and everyone headed off to lunch. There are many places that we can go, but my group decided to go to PMU, the Purdue Memorial Union, which has many small restaurants. I got my usual, a poke bowl, and everyone sat together chatting until it was time to go back to the pharmacy building for lecture (Figure 2).

After lunch, we were treated to a lecture by Dr. Avard, our AAD (her name is a palindrome btw!), who discussed her research in metastatic cancer. Then, we headed back to Chas to continue working on MOE and our papers. My group went into wet lab to rerun our dose-response assays (spoiler alert: the data wasn’t good ;-; ) (Figure 11).

Figure 11: Lab groups working on designing their novel inhibitors in MOE and writing their final research papers in Chas. Depicts Group 7: Aimee, Mingjia, Jimmy (left); Group 11: Bomin, Ian, Nick (center); Group 8: Stanley, Arlene, Yohanna (right).

At 5:30, we were dismissed and headed back to the dorms to change for formal dinner. Dinner was at Ford Dining Hall, where it normally is held on weekdays, and I enjoyed chatting with my fellow participants sitting at my table (Figure 12). After announcements, including the news of a Blind-Deaf-Mute challenge later in the evening, everyone walked back to the dorms together (Figure 6, Figure 7).

Figure 6: SSP participants walking to and from Ford Dining Hall dressed for formal dinner.
Figure 7: SSPers walking as a group after dinner back to Honors dorms. In the center, Ahmad (left) and Elaab (right). SSP participants spend time laughing and bonding together.

As most people went to get ice cream, I decided to take some time for myself and chill. The common areas in Honors South are great places to relax (Figure 5). The Blind-Deaf-Mute challenge afterward was extremely fun; it was interesting seeing everyone’s creations (Figure 11, Figure 12, Figure 13). Everyone hung out after the challenge until 11pm curfew, then it was good night!

Figure 5: Depicts Kendra (left) and Anna B (right) relaxing in Honors South Dorms’ common rooms.
Figure 12: Participants at Ford Dining Hall enjoying formal dinner. Depicts Riya (left) at the pizza station and Olivia (right) at the private SSP seating area.
Figure 13: SSPers getting ready for the Blind-Deaf-Mute challenge. Depicts Arlene (left) setting up the candy, Bomin (center) when instructions were given, and Yafet (right) being blindfolded right before the start of the challenge.

Today was a really eventful day. Not a single day here goes by without me being grateful for my amazing cohort. Everyone here got so close so fast; it’s such a short period of time but we spend so much time together that it feels as if I’ve known everyone for ages. The friendships here feel unique somehow, and I can’t believe that I only have one more week with these amazing people. Thank you everyone for giving me the best summer memories ever!!

Figure 14: Blind-Deaf-Mute challenge commences. Lillian, Nick, and Ryan (left) directly before the Blind-Deaf-Mute challenge, and Pippin, Andrew, and Aimee during the challenge.
Figure 15: SSPers posing with their creations after the Blind-Deaf-Mute challenge. Depicts Alex, Maddox, and Kevin (left); Hana, Ryan, and Olivia (right); Jimmy, Bomin, Ryan (photobomber), and Elbert (center).

-Aimee

The post Day 29- Frogs Make The Best Hats (Biochemistry Purdue II) first appeared on SSP International.

]]>
Day 25- Jay Dills (Biochemistry Purdue II) https://summerscience.org/day-25-jay-dills-biochemistry-purdue-ii/ Tue, 23 Jul 2024 13:29:01 +0000 https://summerscience.org/?p=22973 Today was a day full of activities. The morning started off slow with molecular docking on MOE. After a productive […]

The post Day 25- Jay Dills (Biochemistry Purdue II) first appeared on SSP International.

]]>
Today was a day full of activities. The morning started off slow with molecular docking on MOE. After a productive morning we had lunch which was followed by a lecture by our very own “nobel peace prize winner”: Dr. Mary Keithly as Ryan stated.

Following, the lecture we had the pleasure of listening to the guest speaker, Dr. Milie Georgidas. Dr. Georgidas provided valuable insight on her research regarding synthetic DNA. Her whole idea of “alien DNA” was fascinating and eye-opening as it offered a glimpse into the advancing technology in genetic engineering.

The highlight of the day was undoubtedly the baseball game in the evening. The Lafayette Aviators have never seen a crowd as hype as Purdue 2. The game was filled with different cheers not only of the players and the team, but also a battle between Purdue 1 on who could cheer louder. We definitely came out on top and were the most hype group at that stadium. The dancing was also on par with the cheers. Eventually the game ended with the aviators winning 4-2. Although we left with most of our voices gone everyone had so much fun. 

The bus ride back was the perfect ending to our day. More fun happened as everyone was vibing to the music that our bus driver played. A special shoutout to our bus driver, Rick, who was on aux. Make sure to support his son who is #40 on the Purdue football team. 

Overall, the day was fun and will definitely be a long lasting memory. 

Signing out,

 -Elbert

The post Day 25- Jay Dills (Biochemistry Purdue II) first appeared on SSP International.

]]>
Day 28- A Playlist for SSP (Biochemistry Purdue II) https://summerscience.org/day-28-a-playlist-for-ssp-biochemistry-purdue-ii/ Tue, 23 Jul 2024 13:23:11 +0000 https://summerscience.org/?p=22962 “Sunday Morning” by The Velvet Underground My roommate, Mingjia, and I woke up to a blaring 6:40 alarm, and blearily […]

The post Day 28- A Playlist for SSP (Biochemistry Purdue II) first appeared on SSP International.

]]>
“Sunday Morning” by The Velvet Underground

My roommate, Mingjia, and I woke up to a blaring 6:40 alarm, and blearily fell back asleep until 10 am. The previous week’s oscillation from science to adventures in Lafayette and back finally caught up with us so we begrudgingly enjoyed a peaceful morning. Breakfast was fortune cookies from last night’s Chinese barbecue place (my fortune was a no-brainer for any SSP participant, “There is a prospect of a thrilling time ahead”). Those few hours were peaceful, until Claviceps purpurea, the fungus my group is studying, came calling yet again.

“9 to 5” by Dolly Parton

Ok, well, it being Sunday I didn’t really manage an eight-hour workday, but I took a couple hours to finish writing up my portion of the methodology section of the final report. It was crazy to see how many techniques and procedures we’d learned these past four weeks, and to see hours of time in the wet lab coming together to make our beautiful academic baby.

“Le Festin (Theme from Ratatouille)” by Michael Giacchino

Our group’s plan for lunch was supposed to be a lovely Mediterranean place that did dining al fresco. I say “supposed to be” because as I entered our dorm’s lobby to head out thunder boomed with almost cinematic timing, and we realized going out wasn’t an option. My cohort is nothing if not ingenious (it’s how we ended up featured on the Lafayette Aviators baseball Instagram), and so some of us decided to cook, literally and metaphorically. Lillian boiled water in the basement microwave and made us Buldak ramen, Adi brought granola bars and chocolate covered almonds, and Mingjia and I contributed our intellect to combine them all. I don’t think Lillian will ever get around to appreciating our smashing Buldak sauce and chocolate covered almond combo, but not everyone can have a refined palate.

“Young Folks” by Peter Bjorn and John

After the rain cleared up we hit the town, where we shopped for matching rings at Von’s and I had to fight the urge to buy the shiny, shiny crystals for sale yet again. We also had a quick dinner at Garbanzo Mediterranean because there was no way I wasn’t getting hummus today. The most important stops, however, were the boba shop and Mango Mango Dessert, a cafe whose dishes were themed around the eponymous mango. I had a slice of mango crepe cake with the perfect crepe to filling ratio that melted in my mouth. I’m getting hungry just thinking about it.

“All The Small Things” by blink-182

This was just a small glimpse into the thousands of moments that make SSP such a unique experience. Honestly, there are so many more details I could delve into, like doing each other’s nails in the dorm lounge, downing packs of hazelnut creamer, and rehearsing for our talent show. It’s the minutiae of daily life with this group that has now become almost family and the joy of exploring science with them that make this program amazing.

“Good Riddance” by Green Day

(I swear the song doesn’t match the title at all if you listen it’s really moving and great.)

The rock section at Von’s
Mango Mango desserts!

-Anna

The post Day 28- A Playlist for SSP (Biochemistry Purdue II) first appeared on SSP International.

]]>
The Final Countdown https://summerscience.org/the-final-countdown/ Tue, 23 Jul 2024 03:11:21 +0000 https://summerscience.org/?p=22958 Friday, July 19th, 2024.The end of SSP always felt like something far off in the future. We had all gotten […]

The post The Final Countdown first appeared on SSP International.

]]>
Friday, July 19th, 2024.
The end of SSP always felt like something far off in the future. We had all gotten used to the idea that
we had a long way to go. This often happens with big, highly anticipated moments. They seldom feel real
before they actually begin happening.
Today was a major glimpse into the prospect of SSP ending. The basis for the research project, the
collection of data in the lab, ended today. Whatever numbers we got in our IC50 and continuous assays
would mark how far we got with the project. The day had both a frantic and celebratory air. We raced to
get our experiments set up, and we worked incessantly until the cutoff in the late afternoon.
Then it was all over. I remember vividly pouring out the stock of reaction buffer—which we’d been using
on a daily basis throughout the program—into the sink. It felt wrong. Something told me that that was a
ridiculous thing to do. We’d need it tomorrow…or wait, no. That was it. There was no turning back—or,
rather, continuing.
We packed up our belongings, put away lab equipment, and cleaned the lab. Then we left, for good,
heading over to Lindley Hall for our last “TA talk” of the program. The TA talks are meant (at least I’ve
been told) to be an opportunity for the TAs to act as professors of sorts, presenting their undergraduate
research. I’ve also been told (through the grapevine?) that this year’s TA talks were the least serious in
SSP history. Our TAs are a funny quartet, and we laughed for the hour straight.
The rest of the day was par for the course, though the spectre of the research paper due Sunday night
loomed overhead.

The post The Final Countdown first appeared on SSP International.

]]>
Final Extended Perimeter https://summerscience.org/final-extended-perimeter/ Tue, 23 Jul 2024 03:09:02 +0000 https://summerscience.org/?p=22956 Hi! My name is Bissan, and I’m from Dearborn, MI. Here’s a day in the life at SSP Biochem IUthat […]

The post Final Extended Perimeter first appeared on SSP International.

]]>
Hi! My name is Bissan, and I’m from Dearborn, MI. Here’s a day in the life at SSP Biochem IU
that includes our last extended perimeter outing as well as the first official submission of our
research report.
9:00 AM- I woke up and got ready for the day. Since we are leaving in 3 days and start packing
tomorrow, I made sure to get the rest of my laundry done beforehand. Then, I went down to the
basement in Goodbody to work with my research group on our report.
12:00 PM- After working for a couple hours, I went with some friends to get lunch at Read dining
hall because IMU was closed. We sat there for a bit before heading back to Goodbody.
1:30 PM- We got back from lunch and continued to work on our research reports.
4:00-8:00 PM- We began our last extended perimeter of the program. For today’s extended
perimeter, I went out with Sophie, Sarah, Niyathi, Emily, Katie, Seiya, Arav, Matthew, Remy,
and Noah. It was a big group, but I’m glad I got to spend the the extended perimeter at SSP with
them.
We first went to Target and the mall, where we walked around for a bit. At Target, I bought a
Marvel puzzle that we could all complete during the all nighter Tuesday night.

The post Final Extended Perimeter first appeared on SSP International.

]]>
Day 27- PLEASE READ (Biochemistry Purdue II) https://summerscience.org/day-27-please-read-biochemistry-purdue-ii/ Mon, 22 Jul 2024 21:52:34 +0000 https://summerscience.org/?p=22939 Ah, it’s finally Saturday. Usually, I would sleep in until noon. Unfortunately, we had a mandatory lab in Chas at […]

The post Day 27- PLEASE READ (Biochemistry Purdue II) first appeared on SSP International.

]]>
Ah, it’s finally Saturday. Usually, I would sleep in until noon. Unfortunately, we had a mandatory lab in Chas at 8am, so my roommates and I woke up at 6:30 and snoozed our alarms until 7:15. In the first 3-ish weeks of SSP, I always got breakfast, but recently I’ve been skipping to get more sleep.

In the lab, we analyzed our inhibitor screening data and concluded that it was terrible, so we optimized our procedure by basing our conditions on scientific literature. Then, we spent the next 3 and a half hours redoing our inhibitor screening and it was now time to analyze our data. It turned out to be complete and utter trash, and so much worse than our original data, which meant that we would have to redo it again sometime. But at least it was now time for lunch! And you know what they say—out of sight, out of mind.

So my friends and I went to Jersey Mike’s, only to find out that it was closed, along with every other restaurant on campus. So, we had no choice but to eat at the Ford dining hall. I got a pork cutlet along with onion rings and vegetable minestrone soup, which, surprisingly, wasn’t bad. They also had a fruit loops marshmallow thing for dessert, which also wasn’t bad.

Lunch
Dessert
Here, you can really see my enthusiasm for the meal I was about to eat

Now it was time to go on a field trip!

Me and Cyrus on the bus

First we went to Columbian Park Zoo, where we got to see some animals and pet some goats. 

Goat climbing on our site director’s back
W goat
2 goats
Penguin

Then we walked over to a waterpark 2 minutes away called Tropicanoe Cove. We went on the lazy river and a couple of waterslides, and played some beach volleyball in between. 

W aura

After the waterpark, we headed over to a Chinese/Korean restaurant called Rolling Bowl for dinner. The restaurant did not have any air conditioning whatsoever, so we were all getting cooked alive. The thermostat was set to 92 degrees Fahrenheit and the heat coming from the kitchen was not helping matters. The only worker in the restaurant was Hispanic and couldn’t speak English, which was kind of inconvenient. However, the food was pretty good. We all shared a bowl of kimchi fried rice, beef fried rice, beef noodles (which was terrible), pork belly skewers, and lamb skewers. 

Afterwards, we went to a dessert store across the street called Mango Mango, where I bought a creme brulee crepe cake, which was pretty good.

Then, we went on a target run to buy a crate of water, since Indiana water tastes meh. And finally, we hung out in the basement rec room until it was time to go to bed.

-Neilson

The post Day 27- PLEASE READ (Biochemistry Purdue II) first appeared on SSP International.

]]>
Loops, Lindley, and Lab! https://summerscience.org/loops-lindley-and-lab/ Mon, 22 Jul 2024 01:28:19 +0000 https://summerscience.org/?p=22925 Hey everyone! I’m Emily, and I’ll be taking over the IU biochem blog for today, July 15th! I started off […]

The post Loops, Lindley, and Lab! first appeared on SSP International.

]]>
Hey everyone! I’m Emily, and I’ll be taking over the IU biochem blog for today, July 15th!

I started off the morning by waking up to three of my roommate’s alarms that started going off two hours before I needed to be awake… somehow, they woke up only me and not her. I ate some Fruit Loops as my breakfast and headed over to Lindley Hall for some group work at 9am. My group and I worked until 11:30, looking at different inhibitors and confirmations on MOE and preparing for the lab in the afternoon. 

Then, at 11:30, we went to lunch at the IMU where I got Indian food from The Globe. A big group of us sat at a long table, and we enjoyed the break from working. At around 12:15, most of us started heading over to the Chemistry building where we worked on Lab Session 11 until a little after 5. Today, we focused on one inhibitor and tried to find the IC50, or the concentration of the inhibitor at which our enzyme’s activity was inhibited by 50%. We didn’t finish, but we did manage to make a good amount of progress. 

After the lab, we went back to the dorm where a few of the girls talked until dinner at 6. Thankfully, it was extremely hot, so we could wear shorts. We ate at Forest, and I got a burger and fries. At 8, we had a dorm meeting, where we went over the rough schedule for this week (the last full week!!) and played a couple games for an hour. 

From 9-10, my lab group and I worked on our presentations taking place tomorrow (wish us luck!!). We added finishing touches to some of the slides and practiced them. After turning in our laptops at 9:55, I talked with some friends until our curfew at 11pm. Overall, it was another great day!

The post Loops, Lindley, and Lab! first appeared on SSP International.

]]>